STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA98434.1Oxidoreductase aldo/keto reductase family; Similar to gene syc0479_d of Synechococcus elongatus PCC 6301 similar to gene slr1520 of Synechocystis sp. PCC 6803 similar to gene alr5260 of Nostoc sp. PCC 7120. (374 aa)    
Predicted Functional Partners:
ACA98435.1
Conserved hypothetical protein, TPR domain; Similar to gene slr2048 Synechocystis sp. strain PCC 6803.
       0.705
ACA99465.1
Aldo/keto reductase family; Similar to alr2054 of Nostoc sp. PCC 7120.
 
     0.555
recA
recA protein (recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.504
ACA98404.1
Conserved hypothetical protein, TIGR00268; Similar to slr1717 of Synechocystis sp. PCC 6803.
 
    0.474
ACA98909.1
NCAIR mutase (PurE)-related protein; Similar to sll1489 of Synechocystis sp. PCC 6803.
 
    0.423
hetR
Heterocyst differentiation protein; Similar to hetR gene of Trichodesmium sp. IMS101 and of Nostoc punctiforme PCC 73102 and Nostoc sp. PCC 7120.
       0.414
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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