Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACA98162.1 | ACA98943.1 | SYNPCC7002_A0148 | SYNPCC7002_A0939 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | 0.998 |
ACA98162.1 | ACA99259.1 | SYNPCC7002_A0148 | SYNPCC7002_A1261 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Two-component hybrid sensor and regulator; Similar to all2875 in Nostoc sp. PCC 7120. | 0.999 |
ACA98162.1 | ACA99378.1 | SYNPCC7002_A0148 | SYNPCC7002_A1382 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Two-component hybrid sensor and regulator; Similar to sll1228 in Synechocystis sp. PCC 6803. | 0.999 |
ACA98162.1 | ACA99847.1 | SYNPCC7002_A0148 | SYNPCC7002_A1859 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Sensory box/GGDEF family protein; Similar to all4225 of Nostoc sp. PCC 7120. | 0.979 |
ACA98162.1 | ACB00148.1 | SYNPCC7002_A0148 | SYNPCC7002_A2167 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Sensory box/GGDEF domain/EAL domain protein; Similar to syc0200 of Synechococcus elongatus PCC 6301. | 0.919 |
ACA98162.1 | ACB00342.1 | SYNPCC7002_A0148 | SYNPCC7002_A2364 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Two-component response regulator; Similar to slr1588 of Synechocystis sp. strain PCC 6803. | 0.998 |
ACA98162.1 | ACB00621.1 | SYNPCC7002_A0148 | SYNPCC7002_A2644 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | PAS domain S-box protein; Similar to all2875 of Nostoc sp. PCC 7120. | 0.999 |
ACA98162.1 | ACB00631.1 | SYNPCC7002_A0148 | SYNPCC7002_A2654 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | EAL domain protein. | 0.672 |
ACA98162.1 | ACB00837.1 | SYNPCC7002_A0148 | SYNPCC7002_A2869 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | Sensory box/GGDEF family protein; Similar to slr1305 of Synechocystis sp. PCC 6803. | 0.998 |
ACA98162.1 | pleD | SYNPCC7002_A0148 | SYNPCC7002_A0848 | Two-component hybrid sensor and regulator; PAS domain S-box protein. | PleD protein; Similar to gene slr1798 of Synechocystis sp. PCC 6803. | 0.992 |
ACA98943.1 | ACA98162.1 | SYNPCC7002_A0939 | SYNPCC7002_A0148 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Two-component hybrid sensor and regulator; PAS domain S-box protein. | 0.998 |
ACA98943.1 | ACA99259.1 | SYNPCC7002_A0939 | SYNPCC7002_A1261 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Two-component hybrid sensor and regulator; Similar to all2875 in Nostoc sp. PCC 7120. | 0.998 |
ACA98943.1 | ACA99378.1 | SYNPCC7002_A0939 | SYNPCC7002_A1382 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Two-component hybrid sensor and regulator; Similar to sll1228 in Synechocystis sp. PCC 6803. | 0.991 |
ACA98943.1 | ACA99847.1 | SYNPCC7002_A0939 | SYNPCC7002_A1859 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Sensory box/GGDEF family protein; Similar to all4225 of Nostoc sp. PCC 7120. | 0.771 |
ACA98943.1 | ACB00148.1 | SYNPCC7002_A0939 | SYNPCC7002_A2167 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Sensory box/GGDEF domain/EAL domain protein; Similar to syc0200 of Synechococcus elongatus PCC 6301. | 0.719 |
ACA98943.1 | ACB00342.1 | SYNPCC7002_A0939 | SYNPCC7002_A2364 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Two-component response regulator; Similar to slr1588 of Synechocystis sp. strain PCC 6803. | 0.605 |
ACA98943.1 | ACB00621.1 | SYNPCC7002_A0939 | SYNPCC7002_A2644 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | PAS domain S-box protein; Similar to all2875 of Nostoc sp. PCC 7120. | 0.991 |
ACA98943.1 | ACB00631.1 | SYNPCC7002_A0939 | SYNPCC7002_A2654 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | EAL domain protein. | 0.407 |
ACA98943.1 | ACB00837.1 | SYNPCC7002_A0939 | SYNPCC7002_A2869 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | Sensory box/GGDEF family protein; Similar to slr1305 of Synechocystis sp. PCC 6803. | 0.584 |
ACA98943.1 | pleD | SYNPCC7002_A0939 | SYNPCC7002_A0848 | Sensory box protein/response regulator; Similar to slr1588 in Synechocystis sp. PCC 6803. | PleD protein; Similar to gene slr1798 of Synechocystis sp. PCC 6803. | 0.804 |
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