STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtAmmonium transporter, putative; Similar to sll0537 in Synechocystis sp. PCC 6803. (576 aa)    
Predicted Functional Partners:
glnB
Nitrogen regulatory protein P-II; Similar to ssl0707 in Synechocystis sp. PCC 6803; Belongs to the P(II) protein family.
 
 0.980
ACA98480.1
Conserved hypothetical protein; Similar to slr1513 of Synechocystis sp. PCC 6803.
  
 
 0.854
gltS-2
Ferredoxin-dependent glutamate synthase 2; Similar to sll1499 of Synechocystis sp. PCC 6803.
 
  
 0.800
ACA99664.1
Global nitrogen regulator; Similar to sll1423 in Synechocystis sp. PCC 6803.
      
 0.733
glnA
Glutamine synthetase, type I; Involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia; Belongs to the glutamine synthetase family.
  
  
 0.711
ureB
Urease, beta subunit; Similar to sll0420 of Synechocystis sp. PCC 6803; Belongs to the urease beta subunit family.
  
  
 0.645
ureE
Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
     
 0.638
ureC
Urease, alpha subunit; Similar to sll1750 of Synechocystis sp. PCC 6803.
     
 0.636
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Similar to sll1561 in Synechocystis sp. PCC 6803; Belongs to the aldehyde dehydrogenase family.
  
  
 0.635
ACB00148.1
Sensory box/GGDEF domain/EAL domain protein; Similar to syc0200 of Synechococcus elongatus PCC 6301.
 
      0.634
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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