STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilT-2Twitching motility protein; Similar to sll1533 in Synechocystis sp. PCC 6803. (448 aa)    
Predicted Functional Partners:
pilC
Type IV pilus biogenesis protein; Similar to gene slr0163 of Synechocystis sp. PCC 6803.
 
  
 0.983
pilM
Type IV pilus assembly protein PilM; Similar to slr1274 of Synechocystis sp. PCC 6803.
 
   
 0.982
hofD
Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.811
ACB00772.1
General secretion pathway protein; Similar to sll1694 of Synechocystis sp. PCC 6803.
 
   
 0.637
ACB00773.1
General secretion pathway protein; Similar to sll1694 of Synechocystis sp. PCC 6803.
 
   
 0.634
ACA99209.1
Conserved hypothetical protein; Similar to ssl2148 in Synechocystis sp. PCC 6803.
       0.610
cyaD
Adenylate cyclase; Similar to all0743 of Nostoc sp. PCC 7120.
     
 0.528
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
      
 0.518
dnaB-2
Putative replicative DNA helicase; Similar to slr0833 of Synechocystis sp. PCC 6803.
      
 0.518
phoU
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
      
 0.517
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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