STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA99694.1TPR repeat containing protein; Similar to sll1628 of Synechocystis sp. PCC 6803. (382 aa)    
Predicted Functional Partners:
ACA99688.1
TPR-repeat containing protein; Similar to all0889 of Nostoc sp. PCC 7120.
  
 
  0.829
ACA98435.1
Conserved hypothetical protein, TPR domain; Similar to gene slr2048 Synechocystis sp. strain PCC 6803.
 
 
 0.786
ACB00530.1
TPR domain containing protein; Similar to sll0837 of Synechocystis sp. PCC 6803.
  
     0.763
ACA99384.1
Ankyrin repeat protein; Similar to all2748 of Nostoc sp. PCC 7120.
  
 0.653
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
   0.628
ACA99696.1
DNA or RNA helicases of superfamily II; Similar to all2951 in Nostoc sp. PCC 7120.
   
   0.624
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity.
   
 0.619
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.609
ACA98284.1
WD-repeat protein; Similar to alr7129 of Nostoc sp. PCC 7120.
  
 
  0.585
dnaX
DNA-directed DNA polymerase III chain dnaX; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
   0.540
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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