STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA99722.1ABC 3 transport family protein; Similar to sll1600 of Synechocystis sp. PCC 6803. (287 aa)    
Predicted Functional Partners:
ACA99723.1
ABC transporter family protein; Similar to sll1599 of Synechocystis sp. PCC 6803.
 
 0.999
ACA99724.1
Periplasmic solute binding protein family; Similar to sll1598 of Synechocystis sp. PCC 6803; Belongs to the bacterial solute-binding protein 9 family.
 
 0.995
ACB00478.1
ABC transporter; Similar to slr2044 of Synechocystis sp. strain PCC 6803.
 
 
 0.951
zntC
Zinc ABC transporter, zinc-binding protein; Similar to slr2043 of Synechocystis sp. strain PCC 6803; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.896
ACB00477.1
Zinc ABC transport family protein; Similar to slr2045 Synechocystis sp. PCC 6803.
  
  
 
0.510
ACA99721.1
yrdC domain protein; Similar to slr0006 of Synechocystis sp. PCC 6803; Belongs to the SUA5 family.
       0.470
ACA99725.1
TPR repeat containing protein; Similar to all4382 of Nostoc sp. PCC 7120.
       0.411
ACA98774.1
ABC-type transport protein; Similar to gene slr0251 of Synechocystis sp. strain PCC 6803.
     
 0.410
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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