STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB00127.1Auxin Efflux Carrier superfamily; Similar to alr3703 of Nostoc sp. PCC 7120. (345 aa)    
Predicted Functional Partners:
ACA98456.1
Malic enzyme; Similar to slr0721 of Synechocystis sp. PCC 6803.
  
  
 0.840
ACA98650.1
Conserved hypothetical protein; Similar to slr2052 of Synechocystis sp. strain PCC 6803.
  
     0.663
ACB00126.1
Putative D-alanyl-D-alanine carboxypeptidase; Similar to sll0034 of Synechocystis sp. PCC 6803.
       0.591
ACA99167.1
Conserved hypothetical protein; Similar to alr5049 in Nostoc sp. PCC 7120.
  
     0.519
ACA99573.1
Conserved hypothetical protein; Similar to all1835 in Nostoc sp. PCC 7120.
  
     0.505
ACB00633.1
Hypothetical protein.
  
    0.501
ACA99827.1
Conserved hypothetical protein; Similar to alr3546 of Nostoc sp. PCC 7120.
  
     0.492
ACA98178.1
Conserved hypothetical protein; Similar to all4801 of Nostoc sp. PCC 7120.
 
     0.485
ACA99124.1
FHA domain protein; Similar to alr1728 in Nostoc sp. PCC 7120.
  
     0.473
ACB00125.1
SWIM zinc finger domain protein; Similar to all4155 of Nostoc sp. PCC 7120.
       0.431
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.