STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB00782.1S-layer like protein; Similar to slr1841 of Synechocystis sp. PCC 6803; Belongs to the OprB family. (570 aa)    
Predicted Functional Partners:
sll0832
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.765
sll1424
Conserved hypothetical protein; Similar to sll1424 in Synechocystis sp. PCC 6803.
  
     0.753
ACB00405.1
Permease, YjgP/YjgQ family protein; Similar to slr0882 of Synechocystis sp. PCC 6803.
  
     0.728
ACA99024.1
Putative permease, YjgP/YjgQ family superfamily; Similar to slr0882 in Synechocystis sp. PCC 6803.
  
     0.725
ACA99097.1
AbrB family transciptional regulator; Similar to sll0359 in Synechocystis sp. PCC 6803.
  
     0.686
ACA98328.1
Outer membrane protein, OMP85 family; Similar to slr1227 of Synechocystis sp. PCC 6803.
  
   
 0.681
ACB00314.1
Conserved hypothetical protein; Similar to slr0613 of Synechocystis sp. PCC 6803.
  
     0.669
ACA99841.1
Conserved hypothetical protein; Similar to sll0192 of Synechocystis sp. PCC 6803.
  
     0.664
ACA98509.1
Fimbrial assembly protein (PilN) family; Similar to slr1275 of Synechocystis sp. PCC 6803.
  
     0.623
ACA99238.1
Conserved hypothetical protein; Similar to slr0455 in Synechocystis sp. PCC 6803.
  
     0.594
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.