Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQS86642.1 | AQS86647.1 | A0U93_00295 | A0U93_00320 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.606 |
AQS86642.1 | AQS86648.1 | A0U93_00295 | A0U93_00325 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.583 |
AQS86647.1 | AQS86642.1 | A0U93_00320 | A0U93_00295 | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.606 |
AQS86647.1 | AQS86648.1 | A0U93_00320 | A0U93_00325 | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.871 |
AQS86647.1 | AQS87646.1 | A0U93_00320 | A0U93_06530 | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
AQS86647.1 | AQS88116.1 | A0U93_00320 | A0U93_09380 | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.486 |
AQS86647.1 | AQS89004.1 | A0U93_00320 | A0U93_14990 | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
AQS86648.1 | AQS86642.1 | A0U93_00325 | A0U93_00295 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.583 |
AQS86648.1 | AQS86647.1 | A0U93_00325 | A0U93_00320 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.871 |
AQS87646.1 | AQS86647.1 | A0U93_06530 | A0U93_00320 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.413 |
AQS88116.1 | AQS86647.1 | A0U93_09380 | A0U93_00320 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.486 |
AQS89004.1 | AQS86647.1 | A0U93_14990 | A0U93_00320 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.431 |