STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobTCobaltochelatase subunit CobT; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)    
Predicted Functional Partners:
AQS87017.1
Cobaltochelatase subunit CobS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
AQS87666.1
cob(I)yrinic acid a c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.900
AQS87018.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.699
AQS87475.1
Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.593
AQS89249.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
atpF
Hypothetical protein; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.565
AQS86941.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
AQS88770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
AQS87146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
AQS89006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
Your Current Organism:
Neoasaia chiangmaiensis
NCBI taxonomy Id: 320497
Other names: BCC 15763, N. chiangmaiensis, NBRC 101099, Neoasaia chiangmaiensis Yukphan et al. 2006, strain AC28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.