STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0U93_09510P-type conjugative transfer ATPase TrbB; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)    
Predicted Functional Partners:
AQS88140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.956
trbD
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.949
trbE_2
Conjugal transfer protein TrbE; Type IV secretion system VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.821
trbE_1
Conjugal transfer protein TrbE; Type IV secretion system VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.821
AQS88141.1
Small protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
AQS89083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.788
AQS89116.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.786
AQS89048.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.785
AQS89597.1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
trbF_1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
Your Current Organism:
Neoasaia chiangmaiensis
NCBI taxonomy Id: 320497
Other names: BCC 15763, N. chiangmaiensis, NBRC 101099, Neoasaia chiangmaiensis Yukphan et al. 2006, strain AC28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.