STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK23534.1Uncharacterized conserved membrane protein. (109 aa)    
Predicted Functional Partners:
CAK23535.1
Fe-S cluster protein.
  
    0.801
CAK23533.1
Uncharacterized conserved membrane protein.
 
    
0.737
recJ
Single-stranded DNA-specific exonuclease.
       0.454
CAK23530.1
Uncharacterized conserved membrane protein.
       0.449
vacB
Exoribonuclease R; Belongs to the RNR ribonuclease family.
       0.449
ubiX
Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.444
CAK23536.1
Chloride channel protein.
       0.428
Your Current Organism:
Synechococcus sp. WH 7803
NCBI taxonomy Id: 32051
Other names: S. sp. WH 7803, Synechococcus WH7803, Synechococcus sp. (strain WH7803), Synechococcus sp. WH7803
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.