Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK23079.1 | CAK24176.1 | SynWH7803_0653 | SynWH7803_1750 | Creatininase. | FAD/FMN-containing dehydrogenase. | 0.720 |
CAK23079.1 | codA | SynWH7803_0653 | SynWH7803_1751 | Creatininase. | Cytosine deaminase. | 0.951 |
CAK24176.1 | CAK23079.1 | SynWH7803_1750 | SynWH7803_0653 | FAD/FMN-containing dehydrogenase. | Creatininase. | 0.720 |
CAK24176.1 | CAK24178.1 | SynWH7803_1750 | SynWH7803_1752 | FAD/FMN-containing dehydrogenase. | Uncharacterized conserved secreted protein. | 0.702 |
CAK24176.1 | CAK24179.1 | SynWH7803_1750 | SynWH7803_1753 | FAD/FMN-containing dehydrogenase. | Conserved hypothetical protein. | 0.578 |
CAK24176.1 | CAK24180.1 | SynWH7803_1750 | SynWH7803_1754 | FAD/FMN-containing dehydrogenase. | L-alanine-DL-glutamate epimerase. | 0.625 |
CAK24176.1 | codA | SynWH7803_1750 | SynWH7803_1751 | FAD/FMN-containing dehydrogenase. | Cytosine deaminase. | 0.897 |
CAK24176.1 | glcE | SynWH7803_1750 | SynWH7803_0214 | FAD/FMN-containing dehydrogenase. | Glycolate oxidase subunit GlcE. | 0.731 |
CAK24176.1 | glcF | SynWH7803_1750 | SynWH7803_0216 | FAD/FMN-containing dehydrogenase. | Glycolate oxidase iron-sulfur subunit. | 0.557 |
CAK24176.1 | gltS | SynWH7803_1750 | SynWH7803_0385 | FAD/FMN-containing dehydrogenase. | Ferredoxin-dependent glutamate synthase. | 0.677 |
CAK24176.1 | guaB | SynWH7803_1750 | SynWH7803_1591 | FAD/FMN-containing dehydrogenase. | IMP dehydrogenase/GMP reductase. | 0.439 |
CAK24176.1 | miaB | SynWH7803_1750 | SynWH7803_1755 | FAD/FMN-containing dehydrogenase. | 2-methylthioadenine synthetase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.409 |
CAK24178.1 | CAK24176.1 | SynWH7803_1752 | SynWH7803_1750 | Uncharacterized conserved secreted protein. | FAD/FMN-containing dehydrogenase. | 0.702 |
CAK24178.1 | CAK24179.1 | SynWH7803_1752 | SynWH7803_1753 | Uncharacterized conserved secreted protein. | Conserved hypothetical protein. | 0.566 |
CAK24178.1 | CAK24180.1 | SynWH7803_1752 | SynWH7803_1754 | Uncharacterized conserved secreted protein. | L-alanine-DL-glutamate epimerase. | 0.566 |
CAK24178.1 | codA | SynWH7803_1752 | SynWH7803_1751 | Uncharacterized conserved secreted protein. | Cytosine deaminase. | 0.782 |
CAK24178.1 | miaB | SynWH7803_1752 | SynWH7803_1755 | Uncharacterized conserved secreted protein. | 2-methylthioadenine synthetase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.404 |
CAK24179.1 | CAK24176.1 | SynWH7803_1753 | SynWH7803_1750 | Conserved hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.578 |
CAK24179.1 | CAK24178.1 | SynWH7803_1753 | SynWH7803_1752 | Conserved hypothetical protein. | Uncharacterized conserved secreted protein. | 0.566 |
CAK24179.1 | CAK24180.1 | SynWH7803_1753 | SynWH7803_1754 | Conserved hypothetical protein. | L-alanine-DL-glutamate epimerase. | 0.956 |
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