STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN59867.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
AKN60323.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.892
AKN60521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.876
AKN60241.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.872
AKN61772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.863
AKN59873.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.861
AKN59866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.841
sasA
ATPase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs.
  
  0.838
AKN61391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.805
AKN61788.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.784
AKN61063.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.767
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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