Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKN59880.1Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (673 aa)    
Predicted Functional Partners:
AKN60881.1
Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.965
AKN61623.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.923
AKN60567.1
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.899
AKN60416.1
D-Ala-D-Ala carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.864
AKN60355.1
Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.858
AKN59881.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.815
AKN59882.1
Cytochrome B6; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.806
AKN61133.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
  
 
 0.750
rodA
Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
 
 0.715
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
  
 0.702
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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