Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AKN62066.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)    
Predicted Functional Partners:
AKN60407.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.697
AKN60307.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.586
AKN60096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.575
AKN61516.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.570
AKN60080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
AKN60202.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.507
AKN61283.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.507
AKN60201.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.500
AKN60632.1
Lipid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.500
AKN61661.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
  0.494
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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