STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKN60172.1ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
AKN60437.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.965
AKN62302.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.963
AKN61089.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.946
AKN61501.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.946
AKN60801.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.931
AKN60837.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.931
AKN60155.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.916
rpcA
Phycocyanin; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
    
 0.909
rpcB
Phycocyanin; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
 
  0.906
AKN60786.1
Plastocyanin; Participates in electron transfer in photosystem I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.903
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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