STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN60201.1Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)    
Predicted Functional Partners:
AKN60202.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
AKN62440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
AKN62244.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
AKN60204.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
AKN61008.1
ADP-heptose--LPS heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
AKN61559.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
AKN61283.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.728
AKN62020.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
AKN61805.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
AKN60954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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