STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN62170.1Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
AKN60911.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
AKN62247.1
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
AKN61002.1
Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.750
AKN61774.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.709
AKN60546.1
Nuclease PIN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.632
AKN61338.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
     
 0.487
AKN60446.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.475
AKN60545.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.417
AKN60510.1
Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.415
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.