STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN60759.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
AKN61438.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.932
AKN61391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.863
AKN60521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.760
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.697
AKN60951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1B family.
 
 
 0.659
AKN62020.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
AKN62268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
AKN62330.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
  0.614
AKN60019.1
Potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.592
AKN60008.1
Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.591
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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