Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKN62256.1Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)    
Predicted Functional Partners:
AKN60881.1
Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.630
AKN62257.1
Dihydroorotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.612
AKN60883.1
Histidine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.
  
    0.572
AKN60882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.
       0.541
AKN61003.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.508
AKN62197.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
AKN61002.1
Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.476
AKN62261.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
clpS
Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
 
    0.463
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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