Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AKN62324.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)    
Predicted Functional Partners:
AKN61236.1
Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
AKN61002.1
Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.738
AKN62323.1
High light inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
AKN60207.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.622
AKN60299.1
Multidrug ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.622
AKN60620.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.622
AKN60826.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.622
AKN60568.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.596
AKN60831.1
Rubsico expression protein CbbX; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.555
AKN60970.1
AAA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.555
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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