STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN62324.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)    
Predicted Functional Partners:
AKN60831.1
Rubsico expression protein CbbX; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.813
AKN60970.1
AAA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.813
AKN60568.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.801
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
   0.785
AKN61236.1
Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
AKN62224.1
Membrane protease subunit, stomatin/prohibitin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.671
AKN62323.1
High light inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
AKN62432.1
Apocarotenoid-15,15'-oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.637
AKN61237.1
Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
AKN60477.1
Flotillin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.466
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.