Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKN61319.1Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
AKN59796.1
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
AKN60565.1
BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.972
AKN60347.1
Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.906
AKN60642.1
Phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.879
AKN61410.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.850
AKN60496.1
Molybdenum ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.827
AKN62247.1
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.824
AKN61002.1
Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.823
AKN62345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0367 family.
       0.815
AKN61003.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.797
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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