STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pebADihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family. (236 aa)    
Predicted Functional Partners:
pebB
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
 
  
0.964
cpcS-3
Chorismate-binding protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.957
cpeB
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.870
AKN61740.1
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.865
cpeA
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.863
cpcS-4
Phycoerythrobilin lyase; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.836
cpeY
Hypothetical protein; Involved in the biosynthesis of bilin.
  
   
 0.809
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
     
 0.806
cpcT-2
Chorismate-binding protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.802
mpeA
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
   
 0.798
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.