STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpeZGlycosyltransferase; Involved in the biosynthesis of bilin. (205 aa)    
Predicted Functional Partners:
cpeY
Hypothetical protein; Involved in the biosynthesis of bilin.
    
 0.865
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
    
 0.839
cpeA
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
    
 0.747
mpeV
Glycosyltransferase; An enzyme involved in the biosynthesis of bilin.
     
 0.664
mpeU
Glycosyltransferase; An enzyme involved in the biosynthesis of bilin.
     
 0.656
mpeZ
Bilin biosynthesis protein CpeY; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.640
cpeB
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
    
 0.543
mpeB
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
    
 0.525
rpcA
Phycocyanin; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
    
 0.517
cpcT-2
Chorismate-binding protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
     
 0.499
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.