STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcS-4Phycoerythrobilin lyase; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (179 aa)    
Predicted Functional Partners:
cpcT-2
Chorismate-binding protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
  
 0.974
rpcA
Phycocyanin; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
  
 0.887
AKN61984.1
Phycobilisome linker polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
 
  
 0.883
AKN61985.1
Photosystem I reaction center subunit XII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
 
  
 0.878
cpeA
Bleomycin hydrolase; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
  
 0.875
cpeY
Hypothetical protein; Involved in the biosynthesis of bilin.
  
  
 0.862
AKN61983.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
 
     0.860
cpcT
Chorismate-binding protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.849
rpcB
Phycocyanin; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
  
 0.843
AKN61988.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
 
  
 0.837
Your Current Organism:
Synechococcus sp. WH 8020
NCBI taxonomy Id: 32052
Other names: S. sp. WH 8020, Synechococcus WH8020, Synechococcus sp. (strain WH8020), Synechococcus sp. WH8020
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