STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000331305_05733Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_000331305_07325
Unannotated protein.
   
 
 0.824
GCA_000331305_05734
Unannotated protein.
       0.658
GCA_000331305_01068
Unannotated protein.
    
   0.497
GCA_000331305_03233
Unannotated protein.
    
   0.497
GCA_000331305_05735
Unannotated protein.
       0.486
GCA_000331305_09592
Unannotated protein.
  
  
 0.402
Your Current Organism:
Calothrix sp. PCC7103
NCBI taxonomy Id: 32057
Other names: C. sp. PCC 7103, Calothrix sp. (PCC 7103), Calothrix sp. ATCC 27905, Calothrix sp. CCALA 034, Calothrix sp. PCC 7103, Gloeotrichia sp. UTEX B 583, Nodularia sphaerocarpa M-11.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.