STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000331305_05834Unannotated protein. (537 aa)    
Predicted Functional Partners:
GCA_000331305_05835
Unannotated protein.
 
 
  0.974
GCA_000331305_05162
Unannotated protein.
  
 0.946
GCA_000331305_06474
Unannotated protein.
 
 
  0.938
GCA_000331305_00765
Unannotated protein.
    
 0.902
GCA_000331305_03757
Unannotated protein.
    
 0.902
GCA_000331305_07567
Unannotated protein.
    
 0.902
GCA_000331305_05837
Unannotated protein.
 
     0.873
GCA_000331305_05836
Unannotated protein.
 
     0.872
GCA_000331305_04073
Unannotated protein.
  
 
  0.864
GCA_000331305_02827
Unannotated protein.
  
 
  0.861
Your Current Organism:
Calothrix sp. PCC7103
NCBI taxonomy Id: 32057
Other names: C. sp. PCC 7103, Calothrix sp. (PCC 7103), Calothrix sp. ATCC 27905, Calothrix sp. CCALA 034, Calothrix sp. PCC 7103, Gloeotrichia sp. UTEX B 583, Nodularia sphaerocarpa M-11.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.