STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57129.1TIGRFAM: membrane-bound dehydrogenase domain protein; PFAM: coagulation factor 5/8 type domain protein; cytochrome c class I; KEGG: rba:RB3322 cytochrome c. (872 aa)    
Predicted Functional Partners:
EEF59794.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.984
EEF59795.1
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.981
EEF61942.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.972
EEF61950.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 0.972
EEF63178.1
TIGRFAM: heme-binding protein; KEGG: rba:RB4621 signal peptide.
 
  
  0.935
EEF61987.1
TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rba:RB1988 glucose dehydrogenase-B [pyrroloquinoline-quinone] [precursor].
  
  
  0.924
EEF59799.1
PFAM: cytochrome c class I; Cytochrome b/b6 domain; KEGG: ote:Oter_3544 cytochrome b/b6 domain.
  
  0.915
EEF60881.1
KEGG: rba:RB9713 large, multifunctional secreted protein.
 
 
  0.901
EEF62651.1
KEGG: sen:SACE_2991 secreted glycosyl hydrolase.
 
 
  0.887
EEF60129.1
KEGG: sen:SACE_2991 secreted glycosyl hydrolase.
 
 
  0.882
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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