STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57281.1KEGG: cau:Caur_3409 hypothetical protein. (614 aa)    
Predicted Functional Partners:
EEF57278.1
PFAM: von Willebrand factor type A; KEGG: swo:Swol_1716 conserved putative chloride channel.
     0.977
EEF57282.1
KEGG: rba:RB9424 hypothetical protein.
 
    0.949
EEF58530.1
KEGG: swo:Swol_1724 hypothetical protein.
 
 
  0.787
EEF57283.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rba:RB6603 methanol dehydrogenase regulatory protein (MoxR).
 
 
  0.731
EEF57280.1
PFAM: extracellular solute-binding protein family 1; KEGG: syp:SYNPCC7002_G0113 extracellular solute-binding lipoprotein.
 
     0.725
EEF59085.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mba:Mbar_A3236 xylene monooxygenase electron transfer component.
   
 
  0.695
EEF58070.1
KEGG: rba:RB6045 hypothetical protein.
  
     0.636
EEF57279.1
NHL repeat containing protein; PFAM: binding-protein-dependent transport systems inner membrane component; NHL repeat containing protein; KEGG: rba:RB10820 ring finger protein HAC1.
    
  0.614
EEF57064.1
KEGG: rrs:RoseRS_2418 hypothetical protein.
  
     0.594
EEF63263.1
PFAM: protein of unknown function DUF58; KEGG: cts:Ctha_2438 protein of unknown function DUF58.
  
    0.592
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.