STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57287.1KEGG: sus:Acid_3014 hypothetical protein. (358 aa)    
Predicted Functional Partners:
EEF57288.1
PFAM: glycosyl transferase group 1; KEGG: scl:sce6774 glycosyltransferase.
    0.953
EEF57290.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_PC0000297 putative oxidoreductase protein.
 
     0.945
EEF57289.1
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: smd:Smed_3885 oxidoreductase domain protein.
 
     0.943
EEF57286.1
KEGG: ote:Oter_1139 hypothetical protein.
 
     0.927
EEF57291.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: scl:sce6772 sugar nucleotide epimerase.
 
    0.894
EEF57292.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: scl:sce6771 NDP-sugar oxidoreductase similar to UDP-glucose 4-epimerase.
 
    0.894
EEF57293.1
KEGG: scl:sce1965 hypothetical protein.
 
     0.831
EEF57295.1
KEGG: sme:SMb20251 hypothetical protein.
 
     0.821
EEF61107.1
Methyltransferase type 12; PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: scl:sce6793 putative SAM-dependent methyltransferase.
  
     0.775
EEF61111.1
KEGG: sus:Acid_3015 hypothetical protein.
  
     0.775
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.