STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57453.1PFAM: DoxX family protein; KEGG: gsu:GSU0506 methylamine utilization protein MauE, putative. (162 aa)    
Predicted Functional Partners:
EEF57452.1
PFAM: Rhodanese domain protein; KEGG: gme:Gmet_3018 rhodanese-like.
 
     0.873
EEF57451.1
KEGG: npu:Npun_F4845 hypothetical protein.
       0.499
EEF57446.1
Amylo-alpha-16-glucosidase; PFAM: alpha amylase catalytic region; Amylo-alpha-16-glucosidase; SMART: alpha amylase catalytic sub domain; KEGG: sat:SYN_00295 glycogen debranching enzyme/alpha-amylase.
  
   0.472
EEF61899.1
KEGG: hau:Haur_2822 putative flavin-binding monooxygenase involved in arsenic resistance.
  
    0.442
EEF60649.1
KEGG: min:Minf_0359 hypothetical protein.
  
     0.434
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.