STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57559.1TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rba:RB1988 glucose dehydrogenase-B [pyrroloquinoline-quinone] [precursor]. (1115 aa)    
Predicted Functional Partners:
EEF58178.1
PFAM: Pyrrolo-quinoline quinone; Xylose isomerase domain protein TIM barrel; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone.
  
  
  0.884
EEF62651.1
KEGG: sen:SACE_2991 secreted glycosyl hydrolase.
 
  
  0.848
EEF59505.1
PFAM: putative esterase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: sus:Acid_3430 gluconolactonase.
  
  
  0.846
EEF60129.1
KEGG: sen:SACE_2991 secreted glycosyl hydrolase.
 
  
  0.838
EEF57129.1
TIGRFAM: membrane-bound dehydrogenase domain protein; PFAM: coagulation factor 5/8 type domain protein; cytochrome c class I; KEGG: rba:RB3322 cytochrome c.
  
  
 
0.782
EEF60881.1
KEGG: rba:RB9713 large, multifunctional secreted protein.
  
     0.770
EEF58668.1
KEGG: sus:Acid_1705 signal peptide and transmembrane prediction.
  
  
  0.769
EEF61054.1
PFAM: putative esterase; KEGG: rba:RB6145 hypothetical protein.
  
  
  0.761
EEF57371.1
PFAM: dehydrogenase E1 component; KEGG: sus:Acid_0352 pyruvate dehydrogenase (acetyl-transferring).
   
 
  0.721
pdhA
Pyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 
  0.721
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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