STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57670.1PFAM: conserved hypothetical protein; KEGG: krh:KRH_13720 hypothetical protein. (310 aa)    
Predicted Functional Partners:
EEF57671.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB4803 signal peptide.
       0.462
EEF59307.1
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: ote:Oter_1671 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.460
EEF59702.1
PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: gvi:glr0890 probable ABC transporter permease protein.
  
    0.426
EEF61103.1
PFAM: cyclase/dehydrase; KEGG: sus:Acid_2996 cyclase/dehydrase.
  
    0.407
EEF58353.1
PFAM: cyclase/dehydrase; KEGG: ote:Oter_0066 cyclase/dehydrase.
  
    0.406
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.