STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57821.1KEGG: mxa:MXAN_3431 outer membrane efflux protein. (475 aa)    
Predicted Functional Partners:
EEF57822.1
PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mxa:MXAN_3432 multicopper oxidase domain protein.
 
     0.944
EEF59551.1
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sfu:Sfum_2810 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
   
 
 0.787
EEF57820.1
Hypothetical protein.
       0.773
EEF57823.1
Hypothetical protein.
       0.529
EEF62574.1
PFAM: secretion protein HlyD family protein; KEGG: net:Neut_0975 secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.482
EEF57819.1
Hypothetical protein.
       0.478
EEF61620.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gur:Gura_0088 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.475
EEF60937.1
PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: mxa:MXAN_1763 kelch domain protein.
  
     0.449
EEF57014.1
KEGG: bch:Bcen2424_4412 hypothetical protein.
  
     0.440
EEF62624.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reh:H16_B0582 cation/multidrug efflux system, mebrane-fusion component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.423
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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