STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57889.1PFAM: HEAT domain containing protein; KEGG: ana:alr2986 unknown protein. (234 aa)    
Predicted Functional Partners:
EEF57459.1
PFAM: HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ana:all3465 unknown protein.
  
     0.772
EEF59780.1
PFAM: Armadillo domain protein; HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mba:Mbar_A1826 hypothetical protein.
 
     0.731
EEF57890.1
Hypothetical protein.
       0.636
EEF57891.1
Hypothetical protein.
       0.636
EEF57892.1
Hypothetical protein.
       0.597
EEF58521.1
KEGG: npu:Npun_R1082 hypothetical protein.
  
     0.584
EEF57893.1
Hypothetical protein.
       0.570
EEF57151.1
KEGG: cpc:Cpar_0534 plasmid stabilization system.
  
     0.550
EEF60858.1
PFAM: peptidase U32; KEGG: ava:Ava_0296 peptidase U32.
  
     0.546
EEF60331.1
KEGG: npu:Npun_R4206 hypothetical protein.
  
     0.502
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.