STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58280.1Hypothetical protein; KEGG: min:Minf_1250 ferredoxin. (98 aa)    
Predicted Functional Partners:
EEF59462.1
PFAM: methylenetetrahydrofolate reductase; homocysteine S-methyltransferase; KEGG: bha:BH1629 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
   
 
 0.950
EEF58277.1
Hypothetical protein; KEGG: aae:aq_608 threonine synthase.
 
     0.934
EEF58279.1
PFAM: thiamineS protein; KEGG: amr:AM1_0919 thiamineS protein, putative.
 
     0.929
EEF58278.1
TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: min:Minf_1248 threonine synthase.
 
     0.898
EEF59242.1
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; KEGG: bha:BH2807 manganese transport transcriptional regulator.
    
   0.872
EEF57331.1
Methionine synthase; KEGG: lbj:LBJ_4091 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein.
   
 
 0.802
EEF63199.1
Methionine synthase I (cobalamin-dependent) methyltransferase domain-like protein; KEGG: lch:Lcho_3268 homocysteine S-methyltransferase.
   
 
 0.802
EEF57760.1
KEGG: afw:Anae109_2667 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
   
 
 0.767
EEF62699.1
PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: ote:Oter_2235 homoserine dehydrogenase.
   
 
 0.752
EEF58332.1
KEGG: min:Minf_0228 cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
    
 0.720
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.