STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57974.1PFAM: CoA-binding domain protein; KEGG: gsu:GSU1614 CoA-binding protein. (139 aa)    
Predicted Functional Partners:
EEF59462.1
PFAM: methylenetetrahydrofolate reductase; homocysteine S-methyltransferase; KEGG: bha:BH1629 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
    
  0.723
EEF57973.1
Hypothetical protein; KEGG: ote:Oter_1762 type IV pilus biogenesis protein.
 
     0.566
EEF57686.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: cbf:CLI_2623 transcriptional regulator, Fur family; Belongs to the Fur family.
  
    0.531
EEF60827.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: ote:Oter_2791 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
    0.531
EEF61732.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: ote:Oter_4167 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
    0.531
EEF60843.1
KEGG: gur:Gura_0539 hypothetical protein.
    
   0.530
EEF61166.1
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: ote:Oter_0961 threonine dehydratase.
    
  0.457
EEF60968.1
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: ote:Oter_0961 threonine dehydratase.
    
  0.457
EEF57975.1
Hypothetical protein.
       0.429
EEF58332.1
KEGG: min:Minf_0228 cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
    
  0.420
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.