STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58353.1PFAM: cyclase/dehydrase; KEGG: ote:Oter_0066 cyclase/dehydrase. (207 aa)    
Predicted Functional Partners:
EEF58354.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ote:Oter_0065 alcohol dehydrogenase GroES domain protein.
 
    0.931
EEF61104.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sus:Acid_2995 alcohol dehydrogenase.
  
    0.728
EEF62742.1
KEGG: nca:Noca_2118 hypothetical protein.
  
     0.715
EEF58351.1
PFAM: VanZ family protein; KEGG: cbf:CLI_2742 VanZ family protein.
       0.594
EEF58352.1
PFAM: ComEC/Rec2-related protein; KEGG: dau:Daud_2070 DNA internalization-related competence protein ComEC/Rec2.
       0.594
EEF61922.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ana:all5334 alcohol dehydrogenase.
  
    0.550
EEF61710.1
PFAM: glycosyl transferase group 1; KEGG: ote:Oter_3620 glycosyltransferase.
  
     0.510
EEF59374.1
KEGG: aba:Acid345_1069 outer membrane protein.
  
    0.440
pdxJ
Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
       0.416
EEF58350.1
Hypothetical protein.
       0.416
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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