STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58354.1PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ote:Oter_0065 alcohol dehydrogenase GroES domain protein. (420 aa)    
Predicted Functional Partners:
EEF58353.1
PFAM: cyclase/dehydrase; KEGG: ote:Oter_0066 cyclase/dehydrase.
 
    0.931
EEF59842.1
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0952 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
    
 0.774
EEF62049.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gur:Gura_2970 putative PTS IIA-like nitrogen-regulatory protein PtsN.
  
 
  0.741
EEF59085.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mba:Mbar_A3236 xylene monooxygenase electron transfer component.
  
 
 0.731
glyA
Sugar-phosphate isomerase, RpiB/LacA/LacB family; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.726
EEF61103.1
PFAM: cyclase/dehydrase; KEGG: sus:Acid_2996 cyclase/dehydrase.
  
    0.694
EEF61950.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
     
 0.673
EEF58351.1
PFAM: VanZ family protein; KEGG: cbf:CLI_2742 VanZ family protein.
       0.594
EEF58352.1
PFAM: ComEC/Rec2-related protein; KEGG: dau:Daud_2070 DNA internalization-related competence protein ComEC/Rec2.
       0.594
EEF62742.1
KEGG: nca:Noca_2118 hypothetical protein.
  
     0.461
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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