STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58361.1PFAM: protein of unknown function DUF1486; KEGG: syf:Synpcc7942_0524 hypothetical protein. (142 aa)    
Predicted Functional Partners:
EEF58358.1
Hypothetical protein.
       0.773
EEF58359.1
KEGG: rso:RSc3100 hypothetical protein.
       0.773
EEF58360.1
Hypothetical protein.
       0.773
EEF60076.1
PFAM: protein of unknown function DUF1486; KEGG: smd:Smed_5224 protein of unknown function DUF1486.
  
     0.769
EEF60072.1
PFAM: protein of unknown function DUF1486; KEGG: scl:sce1212 hypothetical protein.
  
     0.763
EEF60098.1
PFAM: protein of unknown function DUF1486; KEGG: rme:Rmet_5449 protein of unknown function DUF1486.
  
     0.634
EEF58356.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.570
EEF58357.1
PFAM: NUDIX hydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: min:Minf_1624 phosphoglycolate phosphatase.
       0.570
EEF58355.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cma:Cmaq_1719 alcohol dehydrogenase GroES domain protein.
       0.524
EEF58362.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: plu:plu0737 hypothetical protein.
 
     0.495
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.