STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58084.1KEGG: rba:RB10398 coenzyme F390 synthetase (FtsA-2). (431 aa)    
Predicted Functional Partners:
EEF61320.1
KEGG: afu:AF1672 acetolactate synthase, small subunit, putative.
 
   0.798
EEF57073.1
KEGG: ote:Oter_0720 conserved hypothetical protein-putative acetolactate synthase small regulatory subunit.
 
   0.793
EEF58083.1
KEGG: rba:RB5184 signal peptide.
       0.775
EEF59085.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mba:Mbar_A3236 xylene monooxygenase electron transfer component.
  
 
 0.765
EEF58797.1
PFAM: acyl-CoA reductase; KEGG: gtn:GTNG_2039 possible acyl protein synthase/acyl-CoA reductase-like protein.
 
  
  0.733
EEF61749.1
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 0.715
EEF61950.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
     
 0.695
EEF58058.1
KEGG: rba:RB9262 putative NAD-dependent aldehyde dehydrogenase.
  
 
  0.693
EEF59878.1
KEGG: ote:Oter_2106 capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
    
  0.688
EEF61036.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: ote:Oter_2106 capsular exopolysaccharide family.
    
  0.688
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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