STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58181.1KEGG: sus:Acid_0789 hypothetical protein. (401 aa)    
Predicted Functional Partners:
pal
TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_3633 peptidoglycan-associated lipoprotein, putative; Belongs to the Pal lipoprotein family.
  
 
   0.751
EEF58182.1
PFAM: OsmC family protein; KEGG: hch:HCH_01483 redox protein, regulator of disulfide bond formation.
       0.689
EEF57284.1
Hypothetical protein; KEGG: sat:SYN_00293 transcriptional regulator-like protein.
  
  
 0.632
EEF60429.1
PFAM: Peptidoglycan-binding LysM; KEGG: lbu:LBUL_0140 cell wall-associated hydrolase.
    
   0.632
EEF62653.1
PFAM: Peptidoglycan-binding LysM; KEGG: min:Minf_1702 LysM domain containing protein.
    
   0.632
EEF62716.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: sfu:Sfum_3764 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD.
    
   0.632
EEF62750.1
PFAM: glycosyl hydrolase family 88; KEGG: ote:Oter_2883 glycosyl hydrolase, family 88.
  
     0.589
EEF62497.1
PFAM: membrane protein of unknown function; KEGG: gur:Gura_2280 membrane protein of unknown function.
 
  
 0.524
EEF58420.1
KEGG: sus:Acid_6537 hypothetical protein.
  
     0.432
EEF61129.1
KEGG: min:Minf_1546 hypothetical protein.
  
     0.405
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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