STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58195.1PFAM: HupE/UreJ protein; KEGG: rpd:RPD_1166 HupE/UreJ protein. (199 aa)    
Predicted Functional Partners:
EEF58196.1
TIGRFAM: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; KEGG: min:Minf_0245 IMP dehydrogenase/GMP reductase.
       0.718
EEF58197.1
Hypothetical protein.
       0.505
EEF58198.1
Hypothetical protein.
       0.505
EEF56988.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sus:Acid_5322 hypothetical protein.
  
     0.483
EEF58193.1
KEGG: mrd:Mrad2831_3341 hypothetical protein.
       0.481
EEF58194.1
PFAM: outer membrane efflux protein; KEGG: bte:BTH_II1186 divalent cation resistant determinant protein C, putative.
       0.481
EEF58192.1
PFAM: acriflavin resistance protein; KEGG: bbt:BBta_1297 multidrug ABC transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.480
EEF58199.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gvi:gll1140 ExbD/TolR family protein.
       0.415
EEF58200.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ote:Oter_0242 MotA/TolQ/ExbB proton channel.
       0.415
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.