STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58224.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rba:RB8693 ABC transporter ATP binding protein. (306 aa)    
Predicted Functional Partners:
EEF60539.1
PFAM: ABC-2 type transporter; KEGG: swo:Swol_2449 ABC-type multidrug transport system permease component.
 
 
 
  0.926
EEF58223.1
Hypothetical protein.
       0.773
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
  
 0.760
EEF58222.1
KEGG: gvi:gll1310 hypothetical protein.
       0.752
EEF60672.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_2513 ABC transporter related.
  
  
  0.635
EEF58225.1
Hypothetical protein.
       0.625
EEF60130.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; KEGG: rba:RB8695 transcription regulator GntR related protein YtrA.
  
    0.606
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.552
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.547
lolD
ABC transporter related-protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
     0.520
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.