STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58604.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1763 ABC transporter related protein. (243 aa)    
Predicted Functional Partners:
EEF58605.1
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4201 putative macrolide efflux ABC transporter, permease protein.
  0.996
EEF63427.1
PFAM: protein of unknown function DUF214; KEGG: cts:Ctha_0585 protein of unknown function DUF214.
 
  0.986
EEF59891.1
PFAM: protein of unknown function DUF214; KEGG: ote:Oter_3645 protein of unknown function DUF214.
 
  0.985
EEF62334.1
PFAM: protein of unknown function DUF214; KEGG: rba:RB6983 ATP-binding/permease fusion ABC transporter.
 
  0.985
EEF63428.1
PFAM: protein of unknown function DUF214; KEGG: cts:Ctha_0584 protein of unknown function DUF214.
 
  0.985
EEF58603.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bfs:BF1935 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.940
EEF59191.1
PFAM: protein of unknown function DUF214; KEGG: sus:Acid_1655 hypothetical protein.
  
  0.833
EEF60282.1
Permease; TIGRFAM: permease; PFAM: protein of unknown function DUF214; KEGG: gvi:gll1201 unknown protein.
  
  0.718
EEF60112.1
KEGG: ote:Oter_1734 nitrate transporter, putative.
 
      0.716
EEF61276.1
PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: dol:Dole_0380 outer membrane lipoprotein carrier protein LolA.
   
 
 0.694
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.