STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58672.1KEGG: afw:Anae109_2703 amylo-alpha-16-glucosidase. (314 aa)    
Predicted Functional Partners:
EEF58671.1
PFAM: Amylo-alpha-16-glucosidase; KEGG: dau:Daud_1533 amylo-alpha-1,6-glucosidase.
     0.994
EEF58673.1
PFAM: glycosyl transferase group 1; KEGG: scl:sce6583 glycogen synthase.
 
  0.958
EEF57047.1
KEGG: pvi:Cvib_1386 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
  
 0.844
EEF58675.1
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase; KEGG: ppd:Ppro_3267 malto-oligosyltrehalose synthase.
 
  
 0.576
EEF58674.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce0047 putative 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.548
EEF58670.1
Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: npu:Npun_F3675 multi-sensor signal transduction histidine kinase.
       0.460
EEF58678.1
KEGG: mta:Moth_1809 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
 
  0.436
EEF60824.1
KEGG: min:Minf_0082 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
   
 0.428
EEF63212.1
KEGG: pst:PSPTO_2895 hypothetical protein.
  
     0.427
EEF58677.1
PFAM: glycoside hydrolase family 57; KEGG: mta:Moth_1810 glycoside hydrolase family protein.
 
 
  0.416
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.