STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58853.1Twitching motility protein; KEGG: sat:SYN_00125 pili retraction protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase. (364 aa)    
Predicted Functional Partners:
EEF58852.1
Twitching motility protein; KEGG: sat:SYN_00126 pili retraction protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.
 
    
0.789
EEF61227.1
PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: gme:Gmet_0959 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A.
 
   
 0.777
EEF57765.1
PFAM: type II secretion system protein; KEGG: ote:Oter_0681 type II secretion system protein.
  
     0.774
EEF59217.1
PFAM: type II secretion system protein; KEGG: ote:Oter_3086 type II secretion system protein.
  
     0.774
EEF61474.1
PFAM: type II secretion system protein; KEGG: ote:Oter_3086 type II secretion system protein.
  
     0.774
EEF62431.1
PFAM: type II secretion system protein; KEGG: sfr:Sfri_3784 type II secretion system protein.
  
     0.774
EEF57197.1
PFAM: type II secretion system protein; KEGG: mxa:MXAN_2512 general secretion pathway protein F.
  
     0.773
EEF58851.1
Hypothetical protein; KEGG: sat:SYN_00127 response regulator receiver domain.
       0.752
EEF57058.1
PFAM: type II secretion system protein; KEGG: pen:PSEEN2334 type II secretion pathway protein F (XcpS-2).
  
     0.751
EEF61496.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: ote:Oter_2849 fimbrial assembly family protein.
 
   
 0.669
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.