STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58540.1PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_2998 ABC transporter related protein. (609 aa)    
Predicted Functional Partners:
EEF62784.1
PFAM: Ankyrin; KEGG: tva:TVAG_470020 ankyrin repeat protein, putative Pfam: Ank PROSITE: ANK_REPEAT ANK_REP_REGION.
   
  0.838
EEF58539.1
KEGG: min:Minf_0649 hypothetical protein.
       0.737
EEF58774.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2651 amino acid ABC transporter, ATP-binding protein.
 
    
0.583
EEF60006.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein.
 
 0.578
EEF60978.1
Amino acid adenylation domain protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
  
 0.578
EEF57970.1
2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: mca:MCA1856 DnaK protein.
  
   0.535
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
   0.525
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
   0.522
EEF58541.1
KEGG: ote:Oter_3080 hypothetical protein.
       0.518
EEF61958.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; Luciferase-like monooxygenase; KEGG: mxa:MXAN_4532 non-ribosomal peptide synthase.
  
 0.506
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.