STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58706.1Conserved hypothetical protein; KEGG: gvi:gll2003 unknown protein; Belongs to the glycosyl hydrolase 1 family. (442 aa)    
Predicted Functional Partners:
EEF61710.1
PFAM: glycosyl transferase group 1; KEGG: ote:Oter_3620 glycosyltransferase.
 
     0.857
EEF61995.1
KEGG: ote:Oter_3624 hypothetical protein.
  
     0.772
EEF60305.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 
  0.732
EEF62191.1
KEGG: reh:H16_A3626 hypothetical protein.
  
 
 0.724
EEF59653.1
KEGG: sus:Acid_1448 thiosulfate reductase cytochrome b subunit (membrane anchoring protein)-like protein.
  
     0.658
EEF61475.1
KEGG: sus:Acid_1436 tagatose-bisphosphate aldolase.
  
  
 0.658
EEF58707.1
KEGG: dac:Daci_2448 hypothetical protein.
       0.620
EEF59898.1
PFAM: glycosyl transferase family 2; glycoside hydrolase family 2 TIM barrel; KEGG: min:Minf_1402 glycosyltransferase.
    
  0.593
EEF61709.1
KEGG: dra:DR_A0367 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like.
  
  0.586
EEF58805.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; KEGG: sus:Acid_4558 YVTN beta-propeller repeat-containing protein.
  
     0.581
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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